Difference between revisions of "SJ19616"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ17851 == * transcription-direction: ** negative * right-end-position: ** 461676 * left-end-position: ** 422006 * centisome-position: ** 63.376446...")
 
(Created page with "Category:gene == Gene SJ19616 == * transcription-direction: ** negative * right-end-position: ** 27570 * left-end-position: ** 12993 * centisome-position: ** 5.797755...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17851 ==
+
== Gene SJ19616 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 461676
+
** 27570
 
* left-end-position:
 
* left-end-position:
−
** 422006
+
** 12993
 
* centisome-position:
 
* centisome-position:
−
** 63.376446    
+
** 5.797755    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.13.1-RXN]]
−
* [[ASPCARBTRANS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBPSYN-RXN]]
+
* [[RXN0-4222]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN0-6479]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DALADALALIG-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDROOROT-RXN]]
+
* [[RXN0-6524]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTAMIN-RXN]]
+
* [[RXN0-6525]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13202]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16909]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16910]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY0-1479]]
−
* [[PWY-5686]]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7790]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7791]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYN-PWY]]
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUTAMINDEG-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-4984]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7693]]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=461676}}
+
{{#set: right-end-position=27570}}
−
{{#set: left-end-position=422006}}
+
{{#set: left-end-position=12993}}
−
{{#set: centisome-position=63.376446   }}
+
{{#set: centisome-position=5.797755   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ19616

  • transcription-direction:
    • negative
  • right-end-position:
    • 27570
  • left-end-position:
    • 12993
  • centisome-position:
    • 5.797755

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19616&oldid=133454"