Difference between revisions of "SJ19729"

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(Created page with "Category:gene == Gene SJ12557 == * transcription-direction: ** positive * right-end-position: ** 14152 * left-end-position: ** 8657 * centisome-position: ** 54.24525 =...")
 
(Created page with "Category:gene == Gene SJ15624 == * transcription-direction: ** positive * right-end-position: ** 282721 * left-end-position: ** 246137 * centisome-position: ** 83.872406...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12557 ==
+
== Gene SJ15624 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 14152
+
** 282721
 
* left-end-position:
 
* left-end-position:
** 8657
+
** 246137
 
* centisome-position:
 
* centisome-position:
** 54.24525    
+
** 83.872406    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.6.5.4-RXN]]
* [[GLUTATHIONE-PEROXIDASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GSHTRAN-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[GST-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13673]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14240]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15288]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15680]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17352]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8635]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6370]]
* [[DETOX1-PWY-1]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-4081]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6842]]
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-4061]]
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY66-374]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7112]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7445]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7533]]
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5466]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6824]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-5469]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=14152}}
+
{{#set: right-end-position=282721}}
{{#set: left-end-position=8657}}
+
{{#set: left-end-position=246137}}
{{#set: centisome-position=54.24525   }}
+
{{#set: centisome-position=83.872406   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:21, 26 August 2019

Gene SJ15624

  • transcription-direction:
    • positive
  • right-end-position:
    • 282721
  • left-end-position:
    • 246137
  • centisome-position:
    • 83.872406

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6370
    • 2 reactions found over 6 reactions in the full pathway