Difference between revisions of "SJ19827"
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(Created page with "Category:gene == Gene SJ05141 == * transcription-direction: ** positive * right-end-position: ** 8145 * left-end-position: ** 3287 * centisome-position: ** 0.6553174 =...") |
(Created page with "Category:gene == Gene SJ19827 == * transcription-direction: ** negative * right-end-position: ** 59183 * left-end-position: ** 12426 * centisome-position: ** 5.664816...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19827 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 59183 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 12426 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 5.664816 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.101-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[4 | + | * [[2.4.1.223-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * | + | * [[2.4.1.94-RXN]] |
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * | + | == Pathway(s) associated == |
| − | *** | + | * [[PWY-7426]] |
| − | {{#set: transcription-direction= | + | ** '''4''' reactions found over '''10''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[PWY-7920]] |
| − | {{#set: left-end-position= | + | ** '''2''' reactions found over '''11''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-6558]] |
| + | ** '''7''' reactions found over '''13''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=59183}} | ||
| + | {{#set: left-end-position=12426}} | ||
| + | {{#set: centisome-position=5.664816 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=3}} | ||
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ19827
- transcription-direction:
- negative
- right-end-position:
- 59183
- left-end-position:
- 12426
- centisome-position:
- 5.664816
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.101-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.223-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.94-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7426
- 4 reactions found over 10 reactions in the full pathway
- PWY-7920
- 2 reactions found over 11 reactions in the full pathway
- PWY-6558
- 7 reactions found over 13 reactions in the full pathway
