Difference between revisions of "SJ19827"

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(Created page with "Category:gene == Gene SJ16805 == * transcription-direction: ** negative * right-end-position: ** 109727 * left-end-position: ** 105267 * centisome-position: ** 38.04703...")
 
(Created page with "Category:gene == Gene SJ19827 == * transcription-direction: ** negative * right-end-position: ** 59183 * left-end-position: ** 12426 * centisome-position: ** 5.664816...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16805 ==
+
== Gene SJ19827 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 109727
+
** 59183
 
* left-end-position:
 
* left-end-position:
−
** 105267
+
** 12426
 
* centisome-position:
 
* centisome-position:
−
** 38.04703    
+
** 5.664816    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.4.1.101-RXN]]
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPSYN-RXN]]
+
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.4.1.94-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[PWY-7426]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-7920]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6558]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7184]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=109727}}
+
{{#set: right-end-position=59183}}
−
{{#set: left-end-position=105267}}
+
{{#set: left-end-position=12426}}
−
{{#set: centisome-position=38.04703   }}
+
{{#set: centisome-position=5.664816   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ19827

  • transcription-direction:
    • negative
  • right-end-position:
    • 59183
  • left-end-position:
    • 12426
  • centisome-position:
    • 5.664816

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7426
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-7920
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19827&oldid=136259"