Difference between revisions of "SJ19829"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Beta-L-arabinosides Beta-L-arabinosides] == * common-name: ** an oligosaccharide with β-l-...")
(Created page with "Category:gene == Gene SJ02437 == * transcription-direction: ** negative * right-end-position: ** 37512 * left-end-position: ** 24860 * centisome-position: ** 18.33117...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Beta-L-arabinosides Beta-L-arabinosides] ==
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== Gene SJ02437 ==
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* common-name:
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* transcription-direction:
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** an oligosaccharide with β-l-arabinopyranose at the non-reducing end
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** negative
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[BETA-L-ARABINOSIDASE-RXN]]
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** 37512
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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== Reaction(s) of unknown directionality ==
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** 24860
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{{#set: common-name=an oligosaccharide with β-l-arabinopyranose at the non-reducing end}}
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* centisome-position:
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** 18.33117   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[GLUTATHIONE-PEROXIDASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GSHTRAN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GST-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PEROXID-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13673]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14240]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[DETOX1-PWY-1]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4081]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6842]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4061]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY66-374]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7112]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7533]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=37512}}
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{{#set: left-end-position=24860}}
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{{#set: centisome-position=18.33117    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=11}}
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{{#set: nb pathway associated=13}}

Revision as of 20:19, 18 December 2020

Gene SJ02437

  • transcription-direction:
    • negative
  • right-end-position:
    • 37512
  • left-end-position:
    • 24860
  • centisome-position:
    • 18.33117

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4081
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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