Difference between revisions of "SJ19894"

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(Created page with "Category:gene == Gene SJ03885 == * transcription-direction: ** negative * right-end-position: ** 21996 * left-end-position: ** 20905 * centisome-position: ** 18.135525...")
(Created page with "Category:gene == Gene SJ12004 == * transcription-direction: ** positive * right-end-position: ** 307054 * left-end-position: ** 288572 * centisome-position: ** 79.65177...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03885 ==
+
== Gene SJ12004 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 21996
+
** 307054
 
* left-end-position:
 
* left-end-position:
** 20905
+
** 288572
 
* centisome-position:
 
* centisome-position:
** 18.135525    
+
** 79.65177    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[2.4.1.119-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
{{#set: right-end-position=21996}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: left-end-position=20905}}
+
* [[RXN-16761]]
{{#set: centisome-position=18.135525   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=307054}}
 +
{{#set: left-end-position=288572}}
 +
{{#set: centisome-position=79.65177   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=1}}

Revision as of 09:25, 27 August 2019

Gene SJ12004

  • transcription-direction:
    • positive
  • right-end-position:
    • 307054
  • left-end-position:
    • 288572
  • centisome-position:
    • 79.65177

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated