Difference between revisions of "SJ19917"

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(Created page with "Category:gene == Gene SJ11915 == * transcription-direction: ** positive * right-end-position: ** 425779 * left-end-position: ** 419860 * centisome-position: ** 54.293667...")
(Created page with "Category:gene == Gene SJ21661 == * transcription-direction: ** negative * right-end-position: ** 234063 * left-end-position: ** 229402 * centisome-position: ** 20.2794...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11915 ==
+
== Gene SJ21661 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 425779
+
** 234063
 
* left-end-position:
 
* left-end-position:
** 419860
+
** 229402
 
* centisome-position:
 
* centisome-position:
** 54.293667    
+
** 20.2794    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-5466]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-5467]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-5468]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-5469]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=negative}}
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
{{#set: right-end-position=234063}}
** '''16''' reactions found over '''19''' reactions in the full pathway
+
{{#set: left-end-position=229402}}
{{#set: transcription-direction=positive}}
+
{{#set: centisome-position=20.2794   }}
{{#set: right-end-position=425779}}
 
{{#set: left-end-position=419860}}
 
{{#set: centisome-position=54.293667   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=1}}
 

Revision as of 18:50, 14 January 2021

Gene SJ21661

  • transcription-direction:
    • negative
  • right-end-position:
    • 234063
  • left-end-position:
    • 229402
  • centisome-position:
    • 20.2794

Organism(s) associated with this gene

Reaction(s) associated