Difference between revisions of "SJ19948"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ04585 == * transcription-direction: ** negative * right-end-position: ** 17163 * left-end-position: ** 8234 * centisome-position: ** 7.850578 =...")
(Created page with "Category:gene == Gene SJ19948 == * transcription-direction: ** negative * right-end-position: ** 48368 * left-end-position: ** 36599 * centisome-position: ** 16.842226...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04585 ==
+
== Gene SJ19948 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 17163
+
** 48368
 
* left-end-position:
 
* left-end-position:
−
** 8234
+
** 36599
 
* centisome-position:
 
* centisome-position:
−
** 7.850578    
+
** 16.842226    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NADH-DEHYDROG-A-RXN]]
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PEROXID-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12440]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-3521]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY0-1335]]
−
* [[PWY-6959]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-4302]]
−
* [[PWY-6960]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-3781]]
−
* [[PWY-6961]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY0-1334]]
−
* [[PWY-7214]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-6692]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-5083]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-2261]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=17163}}
+
{{#set: right-end-position=48368}}
−
{{#set: left-end-position=8234}}
+
{{#set: left-end-position=36599}}
−
{{#set: centisome-position=7.850578   }}
+
{{#set: centisome-position=16.842226   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:09, 18 March 2021

Gene SJ19948

  • transcription-direction:
    • negative
  • right-end-position:
    • 48368
  • left-end-position:
    • 36599
  • centisome-position:
    • 16.842226

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1335
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1334
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19948&oldid=135884"