Difference between revisions of "SJ20035"

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(Created page with "Category:gene == Gene SJ09511 == * transcription-direction: ** positive * right-end-position: ** 32275 * left-end-position: ** 20012 * centisome-position: ** 49.73903...")
(Created page with "Category:gene == Gene SJ20035 == * transcription-direction: ** negative * right-end-position: ** 376874 * left-end-position: ** 361061 * centisome-position: ** 58.045406...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09511 ==
+
== Gene SJ20035 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 32275
+
** 376874
 
* left-end-position:
 
* left-end-position:
−
** 20012
+
** 361061
 
* centisome-position:
 
* centisome-position:
−
** 49.73903    
+
** 58.045406    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.1.47-RXN]]
+
* [[ADDALT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ASPARAGHYD-RXN]]
+
* [[ADENODEAMIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DCMP-DEAMINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[LYSOPHOSPHOLIPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15035]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ASPARAGINE-DEG1-PWY-1]]
+
* [[PWY-7179-1]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[ASPASN-PWY]]
+
* [[PWY-7179]]
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[ASPARAGINE-DEG1-PWY]]
+
* [[PWY-6611]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[SALVADEHYPOX-PWY]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[GLUTAMINDEG-PWY]]
+
* [[PWY-6609]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7409]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY0-1296]]
−
{{#set: right-end-position=32275}}
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=20012}}
+
* [[PWY-7210]]
−
{{#set: centisome-position=49.73903   }}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=376874}}
 +
{{#set: left-end-position=361061}}
 +
{{#set: centisome-position=58.045406   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ20035

  • transcription-direction:
    • negative
  • right-end-position:
    • 376874
  • left-end-position:
    • 361061
  • centisome-position:
    • 58.045406

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7179-1
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7179
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20035&oldid=132268"