Difference between revisions of "SJ20035"

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(Created page with "Category:gene == Gene SJ00568 == * transcription-direction: ** positive * right-end-position: ** 55007 * left-end-position: ** 53667 * centisome-position: ** 32.458572...")
(Created page with "Category:gene == Gene SJ13292 == * transcription-direction: ** negative * right-end-position: ** 54819 * left-end-position: ** 24231 * centisome-position: ** 7.063875...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00568 ==
+
== Gene SJ13292 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 55007
+
** 54819
 
* left-end-position:
 
* left-end-position:
−
** 53667
+
** 24231
 
* centisome-position:
 
* centisome-position:
−
** 32.458572    
+
** 7.063875    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
{{#set: right-end-position=55007}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=53667}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=32.458572   }}
+
** Category: [[orthology]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: nb reaction associated=1}}
+
* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10958]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6368]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6580]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6367]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=54819}}
 +
{{#set: left-end-position=24231}}
 +
{{#set: centisome-position=7.063875   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=3}}

Revision as of 14:44, 5 January 2021

Gene SJ13292

  • transcription-direction:
    • negative
  • right-end-position:
    • 54819
  • left-end-position:
    • 24231
  • centisome-position:
    • 7.063875

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6367
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20035&oldid=54110"