Difference between revisions of "SJ20053"

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(Created page with "Category:gene == Gene SJ03419 == * transcription-direction: ** positive * right-end-position: ** 61954 * left-end-position: ** 47501 * centisome-position: ** 39.162838...")
(Created page with "Category:gene == Gene SJ20053 == * transcription-direction: ** negative * right-end-position: ** 184412 * left-end-position: ** 175839 * centisome-position: ** 82.006805...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03419 ==
+
== Gene SJ20053 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 61954
+
** 184412
 
* left-end-position:
 
* left-end-position:
−
** 47501
+
** 175839
 
* centisome-position:
 
* centisome-position:
−
** 39.162838    
+
** 82.006805    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[UDPNACETYLGALSYN-PWY]]
+
* [[PWY-7214]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[UDPNAGSYN-PWY]]
+
* [[PWY-7445]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6749]]
+
* [[PWY-5466]]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6824]]
−
{{#set: right-end-position=61954}}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
{{#set: left-end-position=47501}}
+
* [[PWY-5469]]
−
{{#set: centisome-position=39.162838   }}
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=184412}}
 +
{{#set: left-end-position=175839}}
 +
{{#set: centisome-position=82.006805   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:06, 18 March 2021

Gene SJ20053

  • transcription-direction:
    • negative
  • right-end-position:
    • 184412
  • left-end-position:
    • 175839
  • centisome-position:
    • 82.006805

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20053&oldid=134302"