Difference between revisions of "SJ20055"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20785 == * transcription-direction: ** positive * right-end-position: ** 93881 * left-end-position: ** 89952 * centisome-position: ** 44.212887...")
(Created page with "Category:gene == Gene SJ20055 == * transcription-direction: ** negative * right-end-position: ** 54176 * left-end-position: ** 31326 * centisome-position: ** 14.609645...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20785 ==
+
== Gene SJ20055 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 93881
+
** 54176
 
* left-end-position:
 
* left-end-position:
−
** 89952
+
** 31326
 
* centisome-position:
 
* centisome-position:
−
** 44.212887    
+
** 14.609645    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[PWY-6545]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7210]]
−
{{#set: right-end-position=93881}}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=89952}}
+
* [[PWY-7198]]
−
{{#set: centisome-position=44.212887   }}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7184]]
−
{{#set: nb reaction associated=2}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=54176}}
 +
{{#set: left-end-position=31326}}
 +
{{#set: centisome-position=14.609645   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ20055

  • transcription-direction:
    • negative
  • right-end-position:
    • 54176
  • left-end-position:
    • 31326
  • centisome-position:
    • 14.609645

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20055&oldid=133469"