Difference between revisions of "SJ20055"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15686 CPD-15686] == * common-name: ** (3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa * s...")
(Created page with "Category:gene == Gene SJ20055 == * transcription-direction: ** negative * right-end-position: ** 54176 * left-end-position: ** 31326 * centisome-position: ** 14.609645...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15686 CPD-15686] ==
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== Gene SJ20055 ==
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* common-name:
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* transcription-direction:
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** (3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccccccc=cc=ccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 54176
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* inchi-key:
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* left-end-position:
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** zzvzpdqtnsjqpz-voxmgfccsa-j
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** 31326
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* molecular-weight:
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* centisome-position:
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** 985.829
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** 14.609645   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14797]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[ATPASE-RXN]]
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{{#set: common-name=(3r)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=zzvzpdqtnsjqpz-voxmgfccsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=985.829}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=54176}}
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{{#set: left-end-position=31326}}
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{{#set: centisome-position=14.609645    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ20055

  • transcription-direction:
    • negative
  • right-end-position:
    • 54176
  • left-end-position:
    • 31326
  • centisome-position:
    • 14.609645

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20055&oldid=133469"