Difference between revisions of "SJ20110"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ10647 == * transcription-direction: ** positive * right-end-position: ** 295901 * left-end-position: ** 275128 * centisome-position: ** 71.14379...")
(Created page with "Category:gene == Gene SJ14890 == * transcription-direction: ** negative * right-end-position: ** 57545 * left-end-position: ** 34340 * centisome-position: ** 11.219545...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10647 ==
+
== Gene SJ14890 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 295901
+
** 57545
 
* left-end-position:
 
* left-end-position:
−
** 275128
+
** 34340
 
* centisome-position:
 
* centisome-position:
−
** 71.14379    
+
** 11.219545    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[SERINE-O-ACETTRAN-RXN]]
−
* [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15043]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-16025]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16032]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16067]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16076]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16077]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16118]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1623]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17008]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17009]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17010]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17011]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17012]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17013]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17014]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17015]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17019]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17020]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17021]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17022]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17023]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17024]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17729]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5514]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6705]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7870]]
−
* [[PWY-5981]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7274]]
−
* [[PWY0-1319]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[CYSTSYN-PWY]]
−
* [[PWY-7411]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7417]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7589]]
+
* [[PWY-6936]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7587]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=57545}}
−
* [[PWY-6453]]
+
{{#set: left-end-position=34340}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=11.219545   }}
−
* [[PWY-5667]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TRIGLSYN-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7782]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=295901}}
 
−
{{#set: left-end-position=275128}}
 
−
{{#set: centisome-position=71.14379   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=26}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:22, 15 March 2021

Gene SJ14890

  • transcription-direction:
    • negative
  • right-end-position:
    • 57545
  • left-end-position:
    • 34340
  • centisome-position:
    • 11.219545

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7870
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7274
    • 1 reactions found over 6 reactions in the full pathway
  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6936
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20110&oldid=122840"