Difference between revisions of "SJ20110"

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(Created page with "Category:gene == Gene SJ00045 == * transcription-direction: ** positive * right-end-position: ** 706887 * left-end-position: ** 685451 * centisome-position: ** 46.659313...")
(Created page with "Category:gene == Gene SJ20110 == * transcription-direction: ** negative * right-end-position: ** 68114 * left-end-position: ** 56229 * centisome-position: ** 26.359978...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00045 ==
+
== Gene SJ20110 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 706887
+
** 68114
 
* left-end-position:
 
* left-end-position:
−
** 685451
+
** 56229
 
* centisome-position:
 
* centisome-position:
−
** 46.659313    
+
** 26.359978    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
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* [[CHORISMATEMUT-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PPDH]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PREPHENATE-DEHYDROGENASE-NADP+-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PREPHENATEDEHYDRAT-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=68114}}
−
* [[PREPHENATEDEHYDROG-RXN]]
+
{{#set: left-end-position=56229}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=26.359978   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5682]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-3462]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[TYRSYN]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6627]]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-3461]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6120]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PHESYN]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7626]]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7432]]
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7303]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=706887}}
 
−
{{#set: left-end-position=685451}}
 
−
{{#set: centisome-position=46.659313   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ20110

  • transcription-direction:
    • negative
  • right-end-position:
    • 68114
  • left-end-position:
    • 56229
  • centisome-position:
    • 26.359978

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20110&oldid=135856"