Difference between revisions of "SJ20141"

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(Created page with "Category:gene == Gene SJ12296 == * transcription-direction: ** negative * right-end-position: ** 209856 * left-end-position: ** 202930 * centisome-position: ** 56.35786...")
(Created page with "Category:gene == Gene SJ22264 == * transcription-direction: ** positive * right-end-position: ** 366888 * left-end-position: ** 356999 * centisome-position: ** 61.268764...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12296 ==
+
== Gene SJ22264 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 209856
+
** 366888
 
* left-end-position:
 
* left-end-position:
−
** 202930
+
** 356999
 
* centisome-position:
 
* centisome-position:
−
** 56.35786    
+
** 61.268764    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PYRROLINECARBREDUCT-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=negative}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=209856}}
+
* [[RXN-9952]]
−
{{#set: left-end-position=202930}}
+
** Category: [[annotation]]
−
{{#set: centisome-position=56.35786   }}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
* [[RXN66-546]]
−
{{#set: nb reaction associated=1}}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-3341]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PROSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=366888}}
 +
{{#set: left-end-position=356999}}
 +
{{#set: centisome-position=61.268764   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=7}}

Revision as of 20:26, 18 December 2020

Gene SJ22264

  • transcription-direction:
    • positive
  • right-end-position:
    • 366888
  • left-end-position:
    • 356999
  • centisome-position:
    • 61.268764

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20141&oldid=44028"