Difference between revisions of "SJ20167"

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(Created page with "Category:gene == Gene SJ02796 == * transcription-direction: ** negative * right-end-position: ** 62410 * left-end-position: ** 21420 * centisome-position: ** 1.974643...")
(Created page with "Category:gene == Gene SJ17319 == * transcription-direction: ** positive * right-end-position: ** 179660 * left-end-position: ** 164827 * centisome-position: ** 62.411774...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02796 ==
+
== Gene SJ17319 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 62410
+
** 179660
 
* left-end-position:
 
* left-end-position:
−
** 21420
+
** 164827
 
* centisome-position:
 
* centisome-position:
−
** 1.974643    
+
** 62.411774    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NAD-KIN-RXN]]
−
* [[5.99.1.2-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[5.99.1.3-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPASE-RXN]]
+
* [[NADH-KINASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[NADPHOS-DEPHOS-PWY-1]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-7269]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-7268]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[NADPHOS-DEPHOS-PWY]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5083]]
−
{{#set: right-end-position=62410}}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=21420}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=1.974643   }}
+
{{#set: right-end-position=179660}}
 +
{{#set: left-end-position=164827}}
 +
{{#set: centisome-position=62.411774   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Revision as of 08:18, 15 March 2021

Gene SJ17319

  • transcription-direction:
    • positive
  • right-end-position:
    • 179660
  • left-end-position:
    • 164827
  • centisome-position:
    • 62.411774

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NADPHOS-DEPHOS-PWY-1
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20167&oldid=120886"