Difference between revisions of "SJ20174"

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(Created page with "Category:gene == Gene SJ19616 == * transcription-direction: ** negative * right-end-position: ** 27570 * left-end-position: ** 12993 * centisome-position: ** 5.797755...")
(Created page with "Category:gene == Gene SJ20174 == * transcription-direction: ** negative * right-end-position: ** 605743 * left-end-position: ** 598241 * centisome-position: ** 96.30548...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19616 ==
+
== Gene SJ20174 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 27570
+
** 605743
 
* left-end-position:
 
* left-end-position:
−
** 12993
+
** 598241
 
* centisome-position:
 
* centisome-position:
−
** 5.797755    
+
** 96.30548    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.13.1-RXN]]
+
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-4222]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[GLUTDEHYD-RXN]]
−
* [[RXN0-6479]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6524]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6525]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY0-1479]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
* [[GLUTAMATE-DEG1-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ALACAT2-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5022]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7126]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[P162-PWY]]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLUTSYNIII-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5675]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY490-3]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=27570}}
+
{{#set: right-end-position=605743}}
−
{{#set: left-end-position=12993}}
+
{{#set: left-end-position=598241}}
−
{{#set: centisome-position=5.797755   }}
+
{{#set: centisome-position=96.30548   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:04, 18 March 2021

Gene SJ20174

  • transcription-direction:
    • negative
  • right-end-position:
    • 605743
  • left-end-position:
    • 598241
  • centisome-position:
    • 96.30548

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUTAMATE-DEG1-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ALACAT2-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5022
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7126
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5675
    • 4 reactions found over 4 reactions in the full pathway
  • PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20174&oldid=133450"