Difference between revisions of "SJ20190"

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(Created page with "Category:gene == Gene SJ16375 == * transcription-direction: ** negative * right-end-position: ** 239101 * left-end-position: ** 228391 * centisome-position: ** 80.77318...")
(Created page with "Category:gene == Gene SJ21618 == * transcription-direction: ** positive * right-end-position: ** 63595 * left-end-position: ** 26274 * centisome-position: ** 13.904971...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16375 ==
+
== Gene SJ21618 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 239101
+
** 63595
 
* left-end-position:
 
* left-end-position:
−
** 228391
+
** 26274
 
* centisome-position:
 
* centisome-position:
−
** 80.77318    
+
** 13.904971    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
−
* [[RXN-12195]]
+
{{#set: right-end-position=63595}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=26274}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=13.904971   }}
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7210]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7198]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7184]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=239101}}
 
−
{{#set: left-end-position=228391}}
 
−
{{#set: centisome-position=80.77318   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
 

Revision as of 09:25, 27 August 2019

Gene SJ21618

  • transcription-direction:
    • positive
  • right-end-position:
    • 63595
  • left-end-position:
    • 26274
  • centisome-position:
    • 13.904971

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20190&oldid=30050"