Difference between revisions of "SJ20221"

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(Created page with "Category:gene == Gene SJ01657 == * transcription-direction: ** negative * right-end-position: ** 492683 * left-end-position: ** 481274 * centisome-position: ** 87.57554...")
(Created page with "Category:gene == Gene SJ20221 == * transcription-direction: ** positive * right-end-position: ** 166651 * left-end-position: ** 164941 * centisome-position: ** 78.098175...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01657 ==
+
== Gene SJ20221 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 492683
+
** 166651
 
* left-end-position:
 
* left-end-position:
−
** 481274
+
** 164941
 
* centisome-position:
 
* centisome-position:
−
** 87.57554    
+
** 78.098175    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACSERLY-RXN]]
+
* [[3.1.4.11-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PHOSPHOLIPASE-C-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12726]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-13334]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SULFOCYS-RXN]]
+
* [[RXN-16261]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[CYSTSYN-PWY]]
+
* [[PWY-6351]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6936]]
+
* [[PWY-7039]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[LIPASYN-PWY]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7870]]
+
* [[PWY-6367]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=492683}}
+
{{#set: right-end-position=166651}}
−
{{#set: left-end-position=481274}}
+
{{#set: left-end-position=164941}}
−
{{#set: centisome-position=87.57554   }}
+
{{#set: centisome-position=78.098175   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ20221

  • transcription-direction:
    • positive
  • right-end-position:
    • 166651
  • left-end-position:
    • 164941
  • centisome-position:
    • 78.098175

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6351
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6367
    • 2 reactions found over 4 reactions in the full pathway




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