Difference between revisions of "SJ20222"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14278 CPD-14278] == * common-name: ** (3r)-3-hydroxy-cerotoyl-coa * smiles: ** cccccccccccc...")
(Created page with "Category:gene == Gene SJ00909 == * transcription-direction: ** negative * right-end-position: ** 97095 * left-end-position: ** 83113 * centisome-position: ** 51.902805...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14278 CPD-14278] ==
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== Gene SJ00909 ==
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* common-name:
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* transcription-direction:
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** (3r)-3-hydroxy-cerotoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** cccccccccccccccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 97095
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* inchi-key:
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* left-end-position:
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** gbmjotouuwgtia-cslactsssa-j
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** 83113
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* molecular-weight:
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* centisome-position:
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** 1158.182
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** 51.902805   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13305]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13301]]
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(3r)-3-hydroxy-cerotoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=gbmjotouuwgtia-cslactsssa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1158.182}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY490-3]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-381]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=97095}}
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{{#set: left-end-position=83113}}
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{{#set: centisome-position=51.902805    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=2}}

Revision as of 20:23, 18 December 2020

Gene SJ00909

  • transcription-direction:
    • negative
  • right-end-position:
    • 97095
  • left-end-position:
    • 83113
  • centisome-position:
    • 51.902805

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-381
    • 3 reactions found over 3 reactions in the full pathway




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