Difference between revisions of "SJ20234"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20339 == * transcription-direction: ** negative * right-end-position: ** 118798 * left-end-position: ** 95089 * centisome-position: ** 45.492123...")
 
(Created page with "Category:gene == Gene SJ20234 == * transcription-direction: ** positive * right-end-position: ** 123838 * left-end-position: ** 113401 * centisome-position: ** 53.83078...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20339 ==
+
== Gene SJ20234 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 118798
+
** 123838
 
* left-end-position:
 
* left-end-position:
** 95089
+
** 113401
 
* centisome-position:
 
* centisome-position:
** 45.492123    
+
** 53.83078    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[HOLOCYTOCHROME-C-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
* [[RXN-12195]]
+
{{#set: right-end-position=123838}}
** Category: [[annotation]]
+
{{#set: left-end-position=113401}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=53.83078   }}
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=118798}}
 
{{#set: left-end-position=95089}}
 
{{#set: centisome-position=45.492123   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ20234

  • transcription-direction:
    • positive
  • right-end-position:
    • 123838
  • left-end-position:
    • 113401
  • centisome-position:
    • 53.83078

Organism(s) associated with this gene

Reaction(s) associated