Difference between revisions of "SJ20236"

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(Created page with "Category:gene == Gene SJ11786 == * transcription-direction: ** negative * right-end-position: ** 174300 * left-end-position: ** 167481 * centisome-position: ** 45.621475...")
 
(Created page with "Category:gene == Gene SJ08912 == * transcription-direction: ** positive * right-end-position: ** 316288 * left-end-position: ** 311868 * centisome-position: ** 72.637245...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11786 ==
+
== Gene SJ08912 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 174300
+
** 316288
 
* left-end-position:
 
* left-end-position:
** 167481
+
** 311868
 
* centisome-position:
 
* centisome-position:
** 45.621475    
+
** 72.637245    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.10.1-RXN]]
* [[2.7.11.18-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ATPASE-RXN]]
+
* [[2.7.12.1-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 25: Line 21:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12195]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-14906]]
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
</div>
+
{{#set: transcription-direction=positive}}
== Pathway(s) associated ==
+
{{#set: right-end-position=316288}}
* [[PWY-7210]]
+
{{#set: left-end-position=311868}}
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: centisome-position=72.637245   }}
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=174300}}
 
{{#set: left-end-position=167481}}
 
{{#set: centisome-position=45.621475   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=4}}
 

Revision as of 14:21, 26 August 2019

Gene SJ08912

  • transcription-direction:
    • positive
  • right-end-position:
    • 316288
  • left-end-position:
    • 311868
  • centisome-position:
    • 72.637245

Organism(s) associated with this gene

Reaction(s) associated