Difference between revisions of "SJ20249"

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(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...")
(Created page with "Category:gene == Gene SJ20249 == * transcription-direction: ** positive * right-end-position: ** 187473 * left-end-position: ** 178573 * centisome-position: ** 84.83480...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12991 ==
+
== Gene SJ20249 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 568486
+
** 187473
 
* left-end-position:
 
* left-end-position:
−
** 559079
+
** 178573
 
* centisome-position:
 
* centisome-position:
−
** 75.4738    
+
** 84.83480    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FORMATETHFLIG-RXN]]
+
* [[RXN-15844]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=187473}}
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
+
{{#set: left-end-position=178573}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=84.83480   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-2161]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2201]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1722]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[CODH-PWY]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[1CMET2-PWY]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[P164-PWY]]
 
−
** '''6''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-5030]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7909]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6613]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=568486}}
 
−
{{#set: left-end-position=559079}}
 
−
{{#set: centisome-position=75.4738   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=11}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ20249

  • transcription-direction:
    • positive
  • right-end-position:
    • 187473
  • left-end-position:
    • 178573
  • centisome-position:
    • 84.83480

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20249&oldid=134255"