Difference between revisions of "SJ20260"
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(Created page with "Category:gene == Gene SJ18578 == * transcription-direction: ** negative * right-end-position: ** 19070 * left-end-position: ** 12481 * centisome-position: ** 1.9319177...") |
(Created page with "Category:gene == Gene SJ20260 == * transcription-direction: ** positive * right-end-position: ** 121384 * left-end-position: ** 110028 * centisome-position: ** 52.410255...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20260 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 121384 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 110028 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 52.410255 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[ACID-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-5822]] |
| − | * [[RXN- | ||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6348]] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY | + | * [[NADPHOS-DEPHOS-PWY]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5083]] |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
| − | * [[ | + | * [[NAD-BIOSYNTHESIS-II]] |
| − | ** ''' | + | ** '''4''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=121384}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=110028}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=52.410255 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} | ||
Latest revision as of 11:01, 18 March 2021
Contents
Gene SJ20260
- transcription-direction:
- positive
- right-end-position:
- 121384
- left-end-position:
- 110028
- centisome-position:
- 52.410255
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ACID-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-5822
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6348
- 1 reactions found over 1 reactions in the full pathway
- NADPHOS-DEPHOS-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
- NAD-BIOSYNTHESIS-II
- 4 reactions found over 3 reactions in the full pathway
