Difference between revisions of "SJ20260"

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(Created page with "Category:gene == Gene SJ03966 == * transcription-direction: ** negative * right-end-position: ** 70482 * left-end-position: ** 60165 * centisome-position: ** 52.68896...")
(Created page with "Category:gene == Gene SJ20260 == * transcription-direction: ** positive * right-end-position: ** 121384 * left-end-position: ** 110028 * centisome-position: ** 52.410255...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03966 ==
+
== Gene SJ20260 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 70482
+
** 121384
 
* left-end-position:
 
* left-end-position:
−
** 60165
+
** 110028
 
* centisome-position:
 
* centisome-position:
−
** 52.68896    
+
** 52.410255    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ACID-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-5822]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6164]]
+
* [[PWY-6348]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[NADPHOS-DEPHOS-PWY]]
−
{{#set: right-end-position=70482}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=60165}}
+
* [[PWY-5083]]
−
{{#set: centisome-position=52.68896   }}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[NAD-BIOSYNTHESIS-II]]
−
{{#set: nb reaction associated=1}}
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=121384}}
 +
{{#set: left-end-position=110028}}
 +
{{#set: centisome-position=52.410255   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=4}}

Revision as of 14:44, 5 January 2021

Gene SJ20260

  • transcription-direction:
    • positive
  • right-end-position:
    • 121384
  • left-end-position:
    • 110028
  • centisome-position:
    • 52.410255

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20260&oldid=53691"