Difference between revisions of "SJ20267"

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(Created page with "Category:gene == Gene SJ11880 == * transcription-direction: ** positive * right-end-position: ** 16371 * left-end-position: ** 1115 * centisome-position: ** 0.3065781...")
(Created page with "Category:gene == Gene SJ20267 == * transcription-direction: ** negative * right-end-position: ** 206909 * left-end-position: ** 202750 * centisome-position: ** 96.57706...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11880 ==
+
== Gene SJ20267 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 16371
+
** 206909
 
* left-end-position:
 
* left-end-position:
−
** 1115
+
** 202750
 
* centisome-position:
 
* centisome-position:
−
** 0.3065781    
+
** 96.57706    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
* [[3.1.3.56-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.3.67-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
+
* [[RXN-10036]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10947]]
+
* [[RXN-8730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 +
* [[PWY-6363]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6368]]
 
* [[PWY-6368]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6362]]
−
{{#set: right-end-position=16371}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=1115}}
+
* [[PWY-6364]]
−
{{#set: centisome-position=0.3065781   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=206909}}
 +
{{#set: left-end-position=202750}}
 +
{{#set: centisome-position=96.57706   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ20267

  • transcription-direction:
    • negative
  • right-end-position:
    • 206909
  • left-end-position:
    • 202750
  • centisome-position:
    • 96.57706

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway




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