Difference between revisions of "SJ20270"

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(Created page with "Category:gene == Gene SJ16634 == * transcription-direction: ** negative * right-end-position: ** 189331 * left-end-position: ** 170828 * centisome-position: ** 61.298763...")
(Created page with "Category:gene == Gene SJ05139 == * transcription-direction: ** positive * right-end-position: ** 184918 * left-end-position: ** 178336 * centisome-position: ** 35.55421...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16634 ==
+
== Gene SJ05139 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 189331
+
** 184918
 
* left-end-position:
 
* left-end-position:
−
** 170828
+
** 178336
 
* centisome-position:
 
* centisome-position:
−
** 61.298763    
+
** 35.55421    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
+
* [[RXN-12003]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1321]]
+
* [[RXN-12005]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13395]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8497]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=184918}}
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=178336}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: centisome-position=35.55421   }}
−
* [[RXN-8647]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY66-375]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5410]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-735]]
 
−
** '''16''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY66-392]]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6917]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5406]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=189331}}
 
−
{{#set: left-end-position=170828}}
 
−
{{#set: centisome-position=61.298763   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
 

Revision as of 08:21, 15 March 2021

Gene SJ05139

  • transcription-direction:
    • positive
  • right-end-position:
    • 184918
  • left-end-position:
    • 178336
  • centisome-position:
    • 35.55421

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20270&oldid=122329"