Difference between revisions of "SJ20314"
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(Created page with "Category:gene == Gene SJ21802 == * transcription-direction: ** positive * right-end-position: ** 487780 * left-end-position: ** 467501 * centisome-position: ** 79.10298...") |
(Created page with "Category:gene == Gene SJ20314 == * transcription-direction: ** negative * right-end-position: ** 552183 * left-end-position: ** 538085 * centisome-position: ** 86.68877...") |
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| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20314 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 552183 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 538085 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 86.68877 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.123-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLYCOGENIN-GLUCOSYLTRANSFERASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-7667]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5337]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6524]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6525]] |
| − | ** ''' | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5067]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=552183}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=538085}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=86.68877 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ20314
- transcription-direction:
- negative
- right-end-position:
- 552183
- left-end-position:
- 538085
- centisome-position:
- 86.68877
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.123-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GLYCOGENIN-GLUCOSYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7667
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5337
- 3 reactions found over 3 reactions in the full pathway
- PWY-6524
- 2 reactions found over 4 reactions in the full pathway
- PWY-6525
- 2 reactions found over 5 reactions in the full pathway
- PWY-5067
- 2 reactions found over 4 reactions in the full pathway
