Difference between revisions of "SJ20314"

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(Created page with "Category:gene == Gene SJ05219 == * transcription-direction: ** positive * right-end-position: ** 92228 * left-end-position: ** 77297 * centisome-position: ** 81.13978...")
(Created page with "Category:gene == Gene SJ20314 == * transcription-direction: ** negative * right-end-position: ** 552183 * left-end-position: ** 538085 * centisome-position: ** 86.68877...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05219 ==
+
== Gene SJ20314 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 92228
+
** 552183
 
* left-end-position:
 
* left-end-position:
−
** 77297
+
** 538085
 
* centisome-position:
 
* centisome-position:
−
** 81.13978    
+
** 86.68877    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-11190]]
+
* [[2.4.1.123-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLYCOGENIN-GLUCOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPERMIDINESYN-RXN]]
+
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7667]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SPERMINE-SYNTHASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[BSUBPOLYAMSYN-PWY]]
+
* [[PWY-5337]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[POLYAMINSYN3-PWY]]
+
* [[PWY-6524]]
−
** '''4''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[ARGSPECAT-PWY]]
+
* [[PWY-6525]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5067]]
−
{{#set: right-end-position=92228}}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=77297}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=81.13978   }}
+
{{#set: right-end-position=552183}}
 +
{{#set: left-end-position=538085}}
 +
{{#set: centisome-position=86.68877   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ20314

  • transcription-direction:
    • negative
  • right-end-position:
    • 552183
  • left-end-position:
    • 538085
  • centisome-position:
    • 86.68877

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5067
    • 2 reactions found over 4 reactions in the full pathway




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