Difference between revisions of "SJ20387"

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(Created page with "Category:gene == Gene SJ04988 == * transcription-direction: ** positive * right-end-position: ** 752127 * left-end-position: ** 742970 * centisome-position: ** 76.94116...")
(Created page with "Category:gene == Gene SJ06077 == * transcription-direction: ** positive * right-end-position: ** 59209 * left-end-position: ** 56608 * centisome-position: ** 67.384056...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04988 ==
+
== Gene SJ06077 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 752127
+
** 59209
 
* left-end-position:
 
* left-end-position:
−
** 742970
+
** 56608
 
* centisome-position:
 
* centisome-position:
−
** 76.94116    
+
** 67.384056    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12196]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7210]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-7198]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7184]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=752127}}
+
{{#set: right-end-position=59209}}
−
{{#set: left-end-position=742970}}
+
{{#set: left-end-position=56608}}
−
{{#set: centisome-position=76.94116   }}
+
{{#set: centisome-position=67.384056   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Revision as of 13:02, 14 January 2021

Gene SJ06077

  • transcription-direction:
    • positive
  • right-end-position:
    • 59209
  • left-end-position:
    • 56608
  • centisome-position:
    • 67.384056

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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