Difference between revisions of "SJ20427"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-16551 CPD-16551] == * common-name: ** β-d-ribose 5-phosphate * smiles: ** c(op([o-])(=...")
(Created page with "Category:gene == Gene SJ20427 == * transcription-direction: ** negative * right-end-position: ** 499923 * left-end-position: ** 490119 * centisome-position: ** 43.15518...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-16551 CPD-16551] ==
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== Gene SJ20427 ==
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* common-name:
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* transcription-direction:
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** β-d-ribose 5-phosphate
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** negative
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* smiles:
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* right-end-position:
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** c(op([o-])(=o)[o-])c1(c(o)c(o)c(o)o1)
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** 499923
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* inchi-key:
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* left-end-position:
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** ktvpxoyakdprhy-txicztdvsa-l
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** 490119
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* molecular-weight:
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* centisome-position:
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** 228.095
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** 43.15518   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-4313-CPD-4205/WATER//CPD-16551/CPD-4209.35.]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[APIGNAR-RXN]]
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{{#set: common-name=β-d-ribose 5-phosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ktvpxoyakdprhy-txicztdvsa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=228.095}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[CHALCONE-ISOMERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-3221]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-7647]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY1F-FLAVSYN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6787]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7397]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7897]]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-2002]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6325]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5059]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=499923}}
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{{#set: left-end-position=490119}}
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{{#set: centisome-position=43.15518    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ20427

  • transcription-direction:
    • negative
  • right-end-position:
    • 499923
  • left-end-position:
    • 490119
  • centisome-position:
    • 43.15518

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-2002
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6325
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway




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