Difference between revisions of "SJ20456"
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(Created page with "Category:gene == Gene SJ03827 == * transcription-direction: ** positive * right-end-position: ** 40462 * left-end-position: ** 2101 * centisome-position: ** 1.8201349...") |
(Created page with "Category:gene == Gene SJ20456 == * transcription-direction: ** negative * right-end-position: ** 1007019 * left-end-position: ** 996055 * centisome-position: ** 87.70306...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20456 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 1007019 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 996055 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 87.70306 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-13185]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN-19202]] |
| − | {{#set: right-end-position= | + | ** Category: [[manual]] |
| − | {{#set: left-end-position= | + | *** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls) |
| − | {{#set: centisome-position= | + | * [[RXN-7984]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-7985]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7949]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5945]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=1007019}} | ||
| + | {{#set: left-end-position=996055}} | ||
| + | {{#set: centisome-position=87.70306 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=2}} | ||
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ20456
- transcription-direction:
- negative
- right-end-position:
- 1007019
- left-end-position:
- 996055
- centisome-position:
- 87.70306
Organism(s) associated with this gene
Reaction(s) associated
- RXN-13185
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-19202
- Category: manual
- source: sjap; tool: unknown-tool; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
- Category: manual
- RXN-7984
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7985
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7949
- 2 reactions found over 2 reactions in the full pathway
- PWY-5945
- 4 reactions found over 4 reactions in the full pathway
