Difference between revisions of "SJ20458"
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(Created page with "Category:gene == Gene SJ22654 == * transcription-direction: ** positive * right-end-position: ** 22569 * left-end-position: ** 18239 * centisome-position: ** 10.6250725...") |
(Created page with "Category:gene == Gene SJ21359 == * transcription-direction: ** positive * right-end-position: ** 154882 * left-end-position: ** 139468 * centisome-position: ** 71.81151...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ21359 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 154882 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 139468 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 71.81151 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[DIAMINOPIMDECARB-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY-2942]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5097]] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[DAPLYSINESYN-PWY]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2941]] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=154882}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=139468}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=71.81151 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated=4}} | + | {{#set: nb reaction associated=1}} |
+ | {{#set: nb pathway associated=4}} |
Revision as of 15:17, 5 January 2021
Contents
Gene SJ21359
- transcription-direction:
- positive
- right-end-position:
- 154882
- left-end-position:
- 139468
- centisome-position:
- 71.81151
Organism(s) associated with this gene
Reaction(s) associated
- DIAMINOPIMDECARB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-2942
- 6 reactions found over 7 reactions in the full pathway
- PWY-5097
- 7 reactions found over 7 reactions in the full pathway
- DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
- PWY-2941
- 6 reactions found over 9 reactions in the full pathway