Difference between revisions of "SJ20486"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ00579 == * transcription-direction: ** positive * right-end-position: ** 108541 * left-end-position: ** 100562 * centisome-position: ** 60.869198...")
(Created page with "Category:gene == Gene SJ20486 == * transcription-direction: ** positive * right-end-position: ** 389770 * left-end-position: ** 366758 * centisome-position: ** 59.343742...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00579 ==
+
== Gene SJ20486 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 108541
+
** 389770
 
* left-end-position:
 
* left-end-position:
** 100562
+
** 366758
 
* centisome-position:
 
* centisome-position:
** 60.869198    
+
** 59.343742    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[SMO]]
+
* [[LACCASE-RXN]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[SQUALENE-MONOOXYGENASE-RXN]]
+
* [[RXN-17351]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6098]]
+
* [[PWY-5466]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
* [[PWY-5670]]
+
* [[PWY-6824]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=108541}}
+
{{#set: right-end-position=389770}}
{{#set: left-end-position=100562}}
+
{{#set: left-end-position=366758}}
{{#set: centisome-position=60.869198   }}
+
{{#set: centisome-position=59.343742   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:09, 18 March 2021

Gene SJ20486

  • transcription-direction:
    • positive
  • right-end-position:
    • 389770
  • left-end-position:
    • 366758
  • centisome-position:
    • 59.343742

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway