Difference between revisions of "SJ20500"

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(Created page with "Category:gene == Gene SJ02064 == * transcription-direction: ** positive * right-end-position: ** 110804 * left-end-position: ** 101668 * centisome-position: ** 71.279434...")
(Created page with "Category:gene == Gene SJ20500 == * transcription-direction: ** negative * right-end-position: ** 128345 * left-end-position: ** 125443 * centisome-position: ** 20.297464...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02064 ==
+
== Gene SJ20500 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 110804
+
** 128345
 
* left-end-position:
 
* left-end-position:
−
** 101668
+
** 125443
 
* centisome-position:
 
* centisome-position:
−
** 71.279434    
+
** 20.297464    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
+
* [[RXN-12610]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12611]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[THI-P-SYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-3841]]
+
* [[PWY-6907]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-2201]]
+
* [[PWY-6893]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[1CMET2-PWY]]
+
* [[PWY-6894]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6908]]
−
{{#set: right-end-position=110804}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=101668}}
+
* [[PWY-7356]]
−
{{#set: centisome-position=71.279434   }}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7357]]
−
{{#set: nb reaction associated=1}}
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
{{#set: nb pathway associated=3}}
+
* [[PWY-6897]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=128345}}
 +
{{#set: left-end-position=125443}}
 +
{{#set: centisome-position=20.297464   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:07, 18 March 2021

Gene SJ20500

  • transcription-direction:
    • negative
  • right-end-position:
    • 128345
  • left-end-position:
    • 125443
  • centisome-position:
    • 20.297464

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6907
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6893
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6894
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6908
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7357
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6897
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20500&oldid=134959"