Difference between revisions of "SJ20513"

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(Created page with "Category:gene == Gene SJ21601 == * transcription-direction: ** negative * right-end-position: ** 135190 * left-end-position: ** 121692 * centisome-position: ** 64.085526...")
 
(Created page with "Category:gene == Gene SJ15379 == * transcription-direction: ** negative * right-end-position: ** 29947 * left-end-position: ** 11728 * centisome-position: ** 1.6641481...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21601 ==
+
== Gene SJ15379 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 135190
+
** 29947
 
* left-end-position:
 
* left-end-position:
−
** 121692
+
** 11728
 
* centisome-position:
 
* centisome-position:
−
** 64.085526    
+
** 1.6641481    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[FORMYLTHFDEFORMYL-RXN]]
−
* [[ALCOHOL-DEHYDROG-GENERIC-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALCOHOL-DEHYDROG-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINOL-DEHYDROGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10781]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10911]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10915]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12448]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13198]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17884]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-2962]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-5424]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7657]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7693]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7694]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7700]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7706]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-276]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN3O-4113]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-478]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7909]]
−
* [[PWY-6587]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5480]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P161-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6333]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5486]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-21]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ETOH-ACETYLCOA-ANA-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY4LZ-257]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7118]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6313]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6342]]
 
−
** '''8''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7013]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7798]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-1801]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3162]]
 
−
** '''2''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7396]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5057]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7111]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5076]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6871]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5078]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5751]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5079]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5082]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6802]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY3O-4108]]
+
* [[P164-PWY]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''17''' reactions in the full pathway
−
* [[PWY66-389]]
+
* [[PWY-5497]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
</div>
+
* [[PWY-2201]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=135190}}
+
{{#set: right-end-position=29947}}
−
{{#set: left-end-position=121692}}
+
{{#set: left-end-position=11728}}
−
{{#set: centisome-position=64.085526   }}
+
{{#set: centisome-position=1.6641481   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=19}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=29}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:21, 26 August 2019

Gene SJ15379

  • transcription-direction:
    • negative
  • right-end-position:
    • 29947
  • left-end-position:
    • 11728
  • centisome-position:
    • 1.6641481

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20513&oldid=17772"