Difference between revisions of "SJ20556"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7206 CPD-7206] == * common-name: ** 8'-apo-β-carotenal * smiles: ** cc(c=cc=c(c=cc1(c(...")
 
(Created page with "Category:gene == Gene SJ20556 == * transcription-direction: ** positive * right-end-position: ** 119460 * left-end-position: ** 109554 * centisome-position: ** 53.194206...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7206 CPD-7206] ==
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== Gene SJ20556 ==
* common-name:
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* transcription-direction:
** 8'-apo-β-carotenal
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** positive
* smiles:
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* right-end-position:
** cc(c=cc=c(c=cc1(c(cccc=1c)(c)c))c)=cc=cc=c(c=cc=c(c=o)c)c
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** 119460
* inchi-key:
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* left-end-position:
** dfmmvlfmmaqxhz-dokbywhisa-n
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** 109554
* molecular-weight:
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* centisome-position:
** 416.645
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** 53.194206   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN-11783]]
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* [[S.japonica_carotenoid_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
== Reaction(s) of unknown directionality ==
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* [[HEMN-RXN]]
{{#set: common-name=8'-apo-β-carotenal}}
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** Category: [[orthology]]
{{#set: inchi-key=inchikey=dfmmvlfmmaqxhz-dokbywhisa-n}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: molecular-weight=416.645}}
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* [[RXN-11586]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[HEMESYN2-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5531]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=119460}}
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{{#set: left-end-position=109554}}
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{{#set: centisome-position=53.194206    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:02, 18 March 2021

Gene SJ20556

  • transcription-direction:
    • positive
  • right-end-position:
    • 119460
  • left-end-position:
    • 109554
  • centisome-position:
    • 53.194206

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway