Difference between revisions of "SJ20565"

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(Created page with "Category:gene == Gene SJ07112 == * transcription-direction: ** negative * right-end-position: ** 144922 * left-end-position: ** 139340 * centisome-position: ** 30.009218...")
(Created page with "Category:gene == Gene SJ18427 == * transcription-direction: ** positive * right-end-position: ** 125667 * left-end-position: ** 119267 * centisome-position: ** 48.33966...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07112 ==
+
== Gene SJ18427 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 144922
+
** 125667
 
* left-end-position:
 
* left-end-position:
−
** 139340
+
** 119267
 
* centisome-position:
 
* centisome-position:
−
** 30.009218    
+
** 48.33966    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.1.1.5-RXN]]
+
* [[3.4.19.12-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=125667}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=119267}}
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: centisome-position=48.33966   }}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MMUM-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-3661]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-3661-1]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ADENOSYLHOMOCYSCAT-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-702]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5441]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=144922}}
 
−
{{#set: left-end-position=139340}}
 
−
{{#set: centisome-position=30.009218   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
 

Revision as of 18:51, 14 January 2021

Gene SJ18427

  • transcription-direction:
    • positive
  • right-end-position:
    • 125667
  • left-end-position:
    • 119267
  • centisome-position:
    • 48.33966

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20565&oldid=97256"