Difference between revisions of "SJ20588"

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(Created page with "Category:gene == Gene SJ17355 == * transcription-direction: ** positive * right-end-position: ** 88502 * left-end-position: ** 80902 * centisome-position: ** 30.739944...")
(Created page with "Category:gene == Gene SJ20588 == * transcription-direction: ** negative * right-end-position: ** 106663 * left-end-position: ** 99683 * centisome-position: ** 48.47287...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17355 ==
+
== Gene SJ20588 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 88502
+
** 106663
 
* left-end-position:
 
* left-end-position:
** 80902
+
** 99683
 
* centisome-position:
 
* centisome-position:
** 30.739944    
+
** 48.47287    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
* [[GDR]]
+
** Category: [[annotation]]
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
* [[GDR_LPAREN_nadp_RPAREN_]]
+
** Category: [[annotation]]
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
* [[GDR_LPAREN_nadp_RPAREN_h]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[GDR_LPAREN_nadp_RPAREN_m]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[GDRh]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[GDRm]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[GLUTATHIONE-REDUCT-NADPH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
</div>
+
{{#set: transcription-direction=negative}}
== Pathway(s) associated ==
+
{{#set: right-end-position=106663}}
* [[PWY-4081]]
+
{{#set: left-end-position=99683}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=48.47287   }}
* [[GLUT-REDOX-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=88502}}
 
{{#set: left-end-position=80902}}
 
{{#set: centisome-position=30.739944   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=2}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ20588

  • transcription-direction:
    • negative
  • right-end-position:
    • 106663
  • left-end-position:
    • 99683
  • centisome-position:
    • 48.47287

Organism(s) associated with this gene

Reaction(s) associated