Difference between revisions of "SJ20603"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...")
(Created page with "Category:gene == Gene SJ07187 == * transcription-direction: ** negative * right-end-position: ** 460599 * left-end-position: ** 433716 * centisome-position: ** 29.684698...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13486 ==
+
== Gene SJ07187 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 7446
+
** 460599
 
* left-end-position:
 
* left-end-position:
** 632
+
** 433716
 
* centisome-position:
 
* centisome-position:
** 5.0555954    
+
** 29.684698    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.11.18-RXN]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN1G-1435]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN1G-1436]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN1G-1437]]
+
{{#set: right-end-position=460599}}
** Category: [[annotation]]
+
{{#set: left-end-position=433716}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=29.684698   }}
* [[RXN1G-1438]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[TREHALOSEPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWYG-321]]
 
** '''26''' reactions found over '''182''' reactions in the full pathway
 
* [[TRESYN-PWY]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7900]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-881]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[TREHALOSESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=7446}}
 
{{#set: left-end-position=632}}
 
{{#set: centisome-position=5.0555954   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
 

Revision as of 11:07, 15 January 2021

Gene SJ07187

  • transcription-direction:
    • negative
  • right-end-position:
    • 460599
  • left-end-position:
    • 433716
  • centisome-position:
    • 29.684698

Organism(s) associated with this gene

Reaction(s) associated