Difference between revisions of "SJ20675"

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(Created page with "Category:gene == Gene SJ12969 == * transcription-direction: ** negative * right-end-position: ** 124358 * left-end-position: ** 110924 * centisome-position: ** 31.835651...")
 
(Created page with "Category:gene == Gene SJ20675 == * transcription-direction: ** positive * right-end-position: ** 11137 * left-end-position: ** 6884 * centisome-position: ** 3.3614595...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12969 ==
+
== Gene SJ20675 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 124358
+
** 11137
 
* left-end-position:
 
* left-end-position:
−
** 110924
+
** 6884
 
* centisome-position:
 
* centisome-position:
−
** 31.835651    
+
** 3.3614595    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.6.4.5-RXN]]
+
* [[1.3.99.5-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ATPASE-RXN]]
+
* [[CHOLESTENONE-5-ALPHA-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CORTISONE-ALPHA-REDUCTASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROGESTERONE-5-ALPHA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12124]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12267]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-13682]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-711]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-9971]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN66-343]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-6032]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-7455]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6943]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-699]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''25''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-2582]]
−
{{#set: right-end-position=124358}}
+
** '''4''' reactions found over '''21''' reactions in the full pathway
−
{{#set: left-end-position=110924}}
+
* [[PWY-6129]]
−
{{#set: centisome-position=31.835651   }}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-378]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=11137}}
 +
{{#set: left-end-position=6884}}
 +
{{#set: centisome-position=3.3614595   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:10, 18 March 2021

Gene SJ20675

  • transcription-direction:
    • positive
  • right-end-position:
    • 11137
  • left-end-position:
    • 6884
  • centisome-position:
    • 3.3614595

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6032
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-7455
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6943
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-699
    • 3 reactions found over 25 reactions in the full pathway
  • PWY-2582
    • 4 reactions found over 21 reactions in the full pathway
  • PWY-6129
    • 3 reactions found over 4 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20675&oldid=136270"