Difference between revisions of "SJ20675"
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(Created page with "Category:gene == Gene SJ17998 == * transcription-direction: ** negative * right-end-position: ** 289384 * left-end-position: ** 286529 * centisome-position: ** 43.649654...") |
(Created page with "Category:gene == Gene SJ20675 == * transcription-direction: ** positive * right-end-position: ** 11137 * left-end-position: ** 6884 * centisome-position: ** 3.3614595...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ20675 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 11137 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 6884 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 3.3614595 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[1.3.99.5-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[CHOLESTENONE-5-ALPHA-REDUCTASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[CORTISONE-ALPHA-REDUCTASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[PROGESTERONE-5-ALPHA-REDUCTASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12124]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12267]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13682]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-711]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-9971]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-343]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6032]] |
− | ** ''' | + | ** '''1''' reactions found over '''10''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-7455]] |
− | {{#set: right-end-position= | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[PWY-6943]] |
− | {{#set: centisome-position= | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-699]] | ||
+ | ** '''3''' reactions found over '''25''' reactions in the full pathway | ||
+ | * [[PWY-2582]] | ||
+ | ** '''4''' reactions found over '''21''' reactions in the full pathway | ||
+ | * [[PWY-6129]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY66-378]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=11137}} | ||
+ | {{#set: left-end-position=6884}} | ||
+ | {{#set: centisome-position=3.3614595 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=10}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ20675
- transcription-direction:
- positive
- right-end-position:
- 11137
- left-end-position:
- 6884
- centisome-position:
- 3.3614595
Organism(s) associated with this gene
Reaction(s) associated
- 1.3.99.5-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- CHOLESTENONE-5-ALPHA-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- CORTISONE-ALPHA-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROGESTERONE-5-ALPHA-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12124
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12267
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13682
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-711
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-9971
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-343
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6032
- 1 reactions found over 10 reactions in the full pathway
- PWY-7455
- 1 reactions found over 2 reactions in the full pathway
- PWY-6943
- 2 reactions found over 3 reactions in the full pathway
- PWY-699
- 3 reactions found over 25 reactions in the full pathway
- PWY-2582
- 4 reactions found over 21 reactions in the full pathway
- PWY-6129
- 3 reactions found over 4 reactions in the full pathway
- PWY66-378
- 3 reactions found over 6 reactions in the full pathway