Difference between revisions of "SJ20683"

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(Created page with "Category:gene == Gene SJ16361 == * transcription-direction: ** negative * right-end-position: ** 226606 * left-end-position: ** 190318 * centisome-position: ** 66.95185...")
 
(Created page with "Category:gene == Gene SJ20683 == * transcription-direction: ** positive * right-end-position: ** 485 * left-end-position: ** 42 * centisome-position: ** 2.9494383 == O...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16361 ==
+
== Gene SJ20683 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 226606
+
** 485
 
* left-end-position:
 
* left-end-position:
−
** 190318
+
** 42
 
* centisome-position:
 
* centisome-position:
−
** 66.95185    
+
** 2.9494383    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.6.4.6-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12195]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-6545]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-7210]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7198]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=226606}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=190318}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=66.95185   }}
+
{{#set: right-end-position=485}}
 +
{{#set: left-end-position=42}}
 +
{{#set: centisome-position=2.9494383   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ20683

  • transcription-direction:
    • positive
  • right-end-position:
    • 485
  • left-end-position:
    • 42
  • centisome-position:
    • 2.9494383

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20683&oldid=136615"