Difference between revisions of "SJ20712"

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(Created page with "Category:gene == Gene SJ13180 == * transcription-direction: ** positive * right-end-position: ** 77031 * left-end-position: ** 66996 * centisome-position: ** 19.427013...")
(Created page with "Category:gene == Gene SJ10553 == * transcription-direction: ** negative * right-end-position: ** 181574 * left-end-position: ** 174782 * centisome-position: ** 45.021263...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13180 ==
+
== Gene SJ10553 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 77031
+
** 181574
 
* left-end-position:
 
* left-end-position:
−
** 66996
+
** 174782
 
* centisome-position:
 
* centisome-position:
−
** 19.427013    
+
** 45.021263    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NICOTINAMIDE-N-METHYLTRANSFERASE-RXN]]
−
* [[1.1.1.39-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4.1.3.17-RXN]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=181574}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=174782}}
−
* [[ADOMET-DMK-METHYLTRANSFER-RXN]]
+
{{#set: centisome-position=45.021263   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MALIC-NADP-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[OXALODECARB-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12074]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-2464]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-7118]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7686]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-3641]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7384]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7701]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[MENAQUINONESYN-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[P184-PWY]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6339]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[METHYLGALLATE-DEGRADATION-PWY]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GALLATE-DEGRADATION-II-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GALLATE-DEGRADATION-I-PWY]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=77031}}
 
−
{{#set: left-end-position=66996}}
 
−
{{#set: centisome-position=19.427013   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=15}}
 

Revision as of 08:20, 15 March 2021

Gene SJ10553

  • transcription-direction:
    • negative
  • right-end-position:
    • 181574
  • left-end-position:
    • 174782
  • centisome-position:
    • 45.021263

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20712&oldid=121783"