Difference between revisions of "SJ20749"

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(Created page with "Category:gene == Gene SJ14154 == * transcription-direction: ** positive * right-end-position: ** 36694 * left-end-position: ** 10747 * centisome-position: ** 1.4958404...")
(Created page with "Category:gene == Gene SJ20749 == * transcription-direction: ** negative * right-end-position: ** 1242 * left-end-position: ** 274 * centisome-position: ** 19.797688 ==...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ14154 ==
+
== Gene SJ20749 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 36694
+
** 1242
 
* left-end-position:
 
* left-end-position:
** 10747
+
** 274
 
* centisome-position:
 
* centisome-position:
** 1.4958404    
+
** 19.797688    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[GAPOXNPHOSPHN-RXN]]
+
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-15115]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TRNA-CHARGING-PWY]]
* [[GLUCONEO-PWY]]
+
** '''21''' reactions found over '''21''' reactions in the full pathway
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[P124-PWY]]
+
{{#set: right-end-position=1242}}
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: left-end-position=274}}
* [[P185-PWY]]
+
{{#set: centisome-position=19.797688   }}
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[P122-PWY]]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY66-399]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7003]]
 
** '''8''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=36694}}
 
{{#set: left-end-position=10747}}
 
{{#set: centisome-position=1.4958404   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:10, 18 March 2021

Gene SJ20749

  • transcription-direction:
    • negative
  • right-end-position:
    • 1242
  • left-end-position:
    • 274
  • centisome-position:
    • 19.797688

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated