Difference between revisions of "SJ20807"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5Z13E-15S-9-ALPHA11-ALPHA15-TRIHY 5Z13E-15S-9-ALPHA11-ALPHA15-TRIHY] == * common-name: ** prost...")
 
(Created page with "Category:gene == Gene SJ20807 == * transcription-direction: ** negative * right-end-position: ** 119244 * left-end-position: ** 114219 * centisome-position: ** 56.18304...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5Z13E-15S-9-ALPHA11-ALPHA15-TRIHY 5Z13E-15S-9-ALPHA11-ALPHA15-TRIHY] ==
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== Gene SJ20807 ==
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* common-name:
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* transcription-direction:
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** prostaglandin f2α
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** negative
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* smiles:
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* right-end-position:
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** cccccc(o)c=cc1(c(o)cc(o)c(cc=ccccc(=o)[o-])1)
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** 119244
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* inchi-key:
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* left-end-position:
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** pxgpltodnuvgfl-ynnpmvkqsa-m
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** 114219
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* molecular-weight:
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* centisome-position:
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** 353.478
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** 56.18304   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[1.1.1.188-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[PROSTAGLANDIN-E2-9-REDUCTASE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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* [[1.1.1.188-RXN]]
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** Category: [[annotation]]
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* [[PROSTAGLANDIN-E2-9-REDUCTASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[F16BDEPHOS-RXN]]
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{{#set: common-name=prostaglandin f2α}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=pxgpltodnuvgfl-ynnpmvkqsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=353.478}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SUGAR-PHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[GLUCONEO-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY66-399]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[SUCSYN-PWY]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=119244}}
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{{#set: left-end-position=114219}}
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{{#set: centisome-position=56.18304    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:01, 18 March 2021

Gene SJ20807

  • transcription-direction:
    • negative
  • right-end-position:
    • 119244
  • left-end-position:
    • 114219
  • centisome-position:
    • 56.18304

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20807&oldid=132051"