Difference between revisions of "SJ20815"

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(Created page with "Category:gene == Gene SJ13560 == * transcription-direction: ** positive * right-end-position: ** 188391 * left-end-position: ** 173065 * centisome-position: ** 51.871777...")
(Created page with "Category:gene == Gene SJ09109 == * transcription-direction: ** negative * right-end-position: ** 4934 * left-end-position: ** 544 * centisome-position: ** 1.2091844 ==...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13560 ==
+
== Gene SJ09109 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 188391
+
** 4934
 
* left-end-position:
 
* left-end-position:
−
** 173065
+
** 544
 
* centisome-position:
 
* centisome-position:
−
** 51.871777    
+
** 1.2091844    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[F16ALDOLASE-RXN]]
+
* [[KETOGLUTREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PGLYCDEHYDROG-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN-8631]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16701]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[P162-PWY]]
−
* [[CALVIN-PWY]]
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[SERSYN-PWY]]
−
* [[GLUCONEO-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7385]]
+
{{#set: right-end-position=4934}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: left-end-position=544}}
−
* [[P341-PWY]]
+
{{#set: centisome-position=1.2091844   }}
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=188391}}
 
−
{{#set: left-end-position=173065}}
 
−
{{#set: centisome-position=51.871777   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=2}}

Revision as of 11:08, 15 January 2021

Gene SJ09109

  • transcription-direction:
    • negative
  • right-end-position:
    • 4934
  • left-end-position:
    • 544
  • centisome-position:
    • 1.2091844

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P162-PWY
    • 7 reactions found over 11 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




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