Difference between revisions of "SJ20857"

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(Created page with "Category:gene == Gene SJ08276 == * transcription-direction: ** positive * right-end-position: ** 24196 * left-end-position: ** 14449 * centisome-position: ** 25.95147...")
(Created page with "Category:gene == Gene SJ09103 == * transcription-direction: ** negative * right-end-position: ** 31578 * left-end-position: ** 29948 * centisome-position: ** 66.44332...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08276 ==
+
== Gene SJ09103 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 24196
+
** 31578
 
* left-end-position:
 
* left-end-position:
−
** 14449
+
** 29948
 
* centisome-position:
 
* centisome-position:
−
** 25.95147    
+
** 66.44332    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DIAMINOPIMDECARB-RXN]]
−
* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1321]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13395]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8647]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
+
* [[PWY-2942]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5410]]
+
* [[PWY-5097]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[DAPLYSINESYN-PWY]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY66-392]]
+
* [[PWY-2941]]
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6917]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=31578}}
−
* [[PWY-5406]]
+
{{#set: left-end-position=29948}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=66.44332   }}
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=24196}}
 
−
{{#set: left-end-position=14449}}
 
−
{{#set: centisome-position=25.95147   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Revision as of 15:23, 5 January 2021

Gene SJ09103

  • transcription-direction:
    • negative
  • right-end-position:
    • 31578
  • left-end-position:
    • 29948
  • centisome-position:
    • 66.44332

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20857&oldid=70891"