Difference between revisions of "SJ20867"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DTDP-DEOH-DEOXY-GLUCOSE DTDP-DEOH-DEOXY-GLUCOSE] == * common-name: ** dtdp-4-dehydro-6-deoxy-&a...")
(Created page with "Category:gene == Gene SJ09366 == * transcription-direction: ** positive * right-end-position: ** 423506 * left-end-position: ** 411196 * centisome-position: ** 50.10571...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DTDP-DEOH-DEOXY-GLUCOSE DTDP-DEOH-DEOXY-GLUCOSE] ==
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== Gene SJ09366 ==
* common-name:
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* transcription-direction:
** dtdp-4-dehydro-6-deoxy-α-d-glucopyranose
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** positive
* smiles:
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* right-end-position:
** cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op(=o)([o-])oc2(oc(c)c(=o)c(o)c(o)2))o3))
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** 423506
* inchi-key:
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* left-end-position:
** psxwnitxwwecny-ucbtuhgzsa-l
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** 411196
* molecular-weight:
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* centisome-position:
** 544.302
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** 50.10571   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[DTDPDEHYDRHAMEPIM-RXN]]
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* [[S.japonica_sterols_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[DTDPGLUCDEHYDRAT-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
== Reaction(s) of unknown directionality ==
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* [[ACETYLGLUTKIN-RXN]]
{{#set: common-name=dtdp-4-dehydro-6-deoxy-&alpha;-d-glucopyranose}}
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** Category: [[annotation]]
{{#set: inchi-key=inchikey=psxwnitxwwecny-ucbtuhgzsa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: molecular-weight=544.302}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[AGK]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[ASPARTATEKIN-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GLUTKIN-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12002]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15005]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[GLUTORN-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5154]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5097]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6559]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[P101-PWY]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2942]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6562]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7153]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[HOMOSERSYN-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6922]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[ARGININE-SYN4-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3341]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[PROSYN-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[CITRULBIO-PWY]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7176]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7400]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=423506}}
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{{#set: left-end-position=411196}}
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{{#set: centisome-position=50.10571    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=19}}

Revision as of 20:19, 18 December 2020

Gene SJ09366

  • transcription-direction:
    • positive
  • right-end-position:
    • 423506
  • left-end-position:
    • 411196
  • centisome-position:
    • 50.10571

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922
    • 5 reactions found over 7 reactions in the full pathway
  • ARGININE-SYN4-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7176
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway